PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr15269.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

NAC

Protein Properties

Length: 350aa MW: 39698.4 Da PI: 7.1968

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr15269.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	179	1.2e-55	15	140	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100 lppGfrFhPtdeel+++yL++kv++ + + ++i+evd++k+ePwdLp k++ +ekewyfFs rd+ky+tg r+nrat++gyWk+tgkdke+++ +g lv Dr15269.1 15 LPPGFRFHPTDEELITYYLTHKVSDYGFVA-RAIAEVDLNKCEPWDLPGKASMGEKEWYFFSLRDRKYPTGLRTNRATDAGYWKTTGKDKEIFQ-SGVLV 112 79***********************999.89***********988999************************************.999 PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 g+kktLvfykgrapkgekt+Wvmheyr Dr15269.1 113 GMKKTLVFYKGRAPKGEKTNWVMHEYRH 140 **************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MLEKYIYVAM EESTLPPGFR FHPTDEELIT YYLTHKVSDY GFVARAIAEV DLNKCEPWDL 60 PGKASMGEKE WYFFSLRDRK YPTGLRTNRA TDAGYWKTTG KDKEIFQSGV LVGMKKTLVF 120 YKGRAPKGEK TNWVMHEYRH QTKFPYRPTK EEWVVCRVFR KSSNGKKSQP TTPSFPSLLE 180 SPCNTNSLSD VGELDVSIFS NLVNHSNSFE AEQTIETSVT NTTTTTTTTT NNNNNSNNNH 240 NKIMDMGSMY MNWVLNREAM SSTSLLPWPA SSLLGSNLST NQTILKPLPF TGYHHHHHQE 300 EASNVTAPLS SFIQQETLFG AELKSSFPAA SSSKASDTVS HHPFEQESIW

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MLEKYIYVAM EESTLPPGFR FHPTDEELIT YYLTHKVSDY GFVARAIAEV DLNKCEPWDL  60
PGKASMGEKE WYFFSLRDRK YPTGLRTNRA TDAGYWKTTG KDKEIFQSGV LVGMKKTLVF  120
YKGRAPKGEK TNWVMHEYRH QTKFPYRPTK EEWVVCRVFR KSSNGKKSQP TTPSFPSLLE  180
SPCNTNSLSD VGELDVSIFS NLVNHSNSFE AEQTIETSVT NTTTTTTTTT NNNNNSNNNH  240
NKIMDMGSMY MNWVLNREAM SSTSLLPWPA SSLLGSNLST NQTILKPLPF TGYHHHHHQE  300
EASNVTAPLS SFIQQETLFG AELKSSFPAA SSSKASDTVS HHPFEQESIW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18400.1	5e-97	NAC family protein

Link Out ? help Back to Top
Ensembl	Dr15269.1