PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr15276.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family MYB_related
Protein Properties Length: 198aa    MW: 22827.7 Da    PI: 6.7171
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr15276.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.25.9e-162265146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                     rg+ T eE +l+ +++ ++G++ W++Ia++++ gRt++++k++w++
        Dr15276.1 22 RGNLTLEEKLLIFELHSKWGNR-WSRIAQHLP-GRTDNEIKNYWRT 65
                     7899******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MSEKKGALKL RWLNYLKPDV KRGNLTLEEK LLIFELHSKW GNRWSRIAQH LPGRTDNEIK  60
NYWRTRVQKQ AKHMKIDGIR CYWNSSSSNT NNNIIMNQTM HENPQEFINP AAMQIQDELQ  120
NMVLSSFSNS GDHQQHYHNS INELQTLDLA FMADSSNGAV ADQDIDAGNL IEMAHGQWMT  180
CGLLENYCMN GVAFDQLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68320.11e-38MYB family protein