PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr15337.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 128aa    MW: 14284.8 Da    PI: 6.5482
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr15337.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.73.8e-201464255
        AP2  2 gykGVrwdkkrgrWvAeIrdpseng.kr.krfslgkfgtaeeAakaaiaarkkleg 55
               +y+GVr+++ +g+++AeIrd      ++  r++lg+f+taeeAa+a+++a+ +++g
  Dr15337.1 14 KYRGVRRRP-WGKFAAEIRD----SaRHgVRVWLGTFDTAEEAARAYDRAAYSMRG 64
               8********.**********....33236*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 128 aa     Download sequence    
MEQDGSSKGE GEVKYRGVRR RPWGKFAAEI RDSARHGVRV WLGTFDTAEE AARAYDRAAY  60
SMRGSLAVLN FPNEVHLLQR GSSSSSGASS SSLVGANKKE VIEFEYLDDK VLEDMLEYGE  120
NEKGYKKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G04370.12e-31ERF family protein