PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr15338.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 151aa    MW: 17123.3 Da    PI: 8.8259
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr15338.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.8e-192776355
        AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               y+GVr+++ +g+++AeIrd + ng   r++lg+f +aeeAa a+++a+ +++g
  Dr15338.1 27 YRGVRRRP-WGKFAAEIRDSTRNG--VRVWLGTFESAEEAAMAYDQAAFSMRG 76
               9*******.**********44465..*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    
MASSSSSSFE TLSSYTEPSE KKKNMTYRGV RRRPWGKFAA EIRDSTRNGV RVWLGTFESA  60
EEAAMAYDQA AFSMRGPRAM LNFPVEKVVE SLKSLGCGEE EDDYGNCSPA MALKRKHSMR  120
RRRRRSERLV LEDLGSQYLE ELLSASLMDS C
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1120125RRRRRR
2120128RRRRRRSER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.13e-41ERF family protein