PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr15374.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family bHLH
Protein Properties Length: 196aa    MW: 21912.4 Da    PI: 8.3352
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr15374.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.44.5e-12249454
               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
        HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
               +h ++Er+RR+++N+ +  Lr+l P+    + k+ + a+i   A+e+Ik+L
  Dr15374.1  2 SHIAVERNRRRQMNEHLKVLRSLTPPF---YIKRGDQASIIGGAIEFIKEL 49
               89************************9...9******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MSHIAVERNR RRQMNEHLKV LRSLTPPFYI KRGDQASIIG GAIEFIKELH QVLQSLEAKK  60
RRKSISPSPT TPSPKPLLLL PPPQQMSLSL PLDSXHSIDT LKELGASCNS PVADVEAKIS  120
GSNVLLRTLS KRIPGQVIKI ITVLEKLDFE ILHLNISSME DTVLYSFVIK IGLECQLSVE  180
ELALEVQQCF CQDVAY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15963KKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06120.14e-81bHLH family protein