PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr15770.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family C2H2
Protein Properties Length: 330aa    MW: 36608.5 Da    PI: 6.4992
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr15770.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H222.52.9e-07425223
               EETTTTEEESSHHHHHHHHHHT CS
    zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
               +Cp+C+++F++ s+L+rH ++H
  Dr15770.1  4 SCPICSTCFPTLSDLERHVNNH 25
               6*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MLSSCPICST CFPTLSDLER HVNNHFVDDE LERDMELAEQ IALAPPSPIQ MSGSSVEGVT  60
PESSTLRLKA HDYGEPPHLQ LGISSLVSLQ TKSTFYKVEG GLMTLLRRCL ELEKGSSKSI  120
ITGHIDHYQS LKSEDHGWGC GWRNIQMLSS HLLMQNQEVR DVMFGGCGFV PDIPSLQRWL  180
EIAWRKGFDS DGSETFCNKI YGTTKWIGTT ECAALLCSFG LRARVVDFDS LSSPSPSLAN  240
VNLGAKGKDG NHQHPRDKRK AKQVYGPLDK FLIQRKPSAS SVGVLSCESS QHVLHAGTLI  300
DDDCNQYNGE IKSHHILVDW YQLPCSWISS