PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr15995.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

NF-YB

Protein Properties

Length: 169aa MW: 17948 Da PI: 6.5292

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr15995.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	180.5	1.4e-56	21	114	1	94
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrele 94 vreqdr+lPian+srimkk+lPan+ki+kdaketvqecvsefisf+tseasdkcq+ekrktingddllwa+atlGfedy+eplk+yl+kyre + Dr15995.1 21 VREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKLYLQKYREGD 114 69*****************************************************************************************966 PP

Sequence ? help Back to Top
Protein Sequence Length: 169 aa Download sequence
MAEAPGSPGG SGGEGSPRSG VREQDRYLPI ANISRIMKKA LPANGKIAKD AKETVQECVS 60 EFISFITSEA SDKCQKEKRK TINGDDLLWA MATLGFEDYI EPLKLYLQKY REGDSKATAK 120 GGDGSLSKDG GGIQVGTPGT STQGIAPQGS FTQGMNYIHT QFHNGDLSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38880.7	2e-64	NF-YB family protein

Link Out ? help Back to Top
Ensembl	Dr15995.1