PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr15998.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

Dof

Protein Properties

Length: 324aa MW: 35813.6 Da PI: 8.5455

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr15998.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	127.5	4e-40	90	151	2	63
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 +e+alkcprC+stntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rknkksss Dr15998.1 90 PETALKCPRCESTNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNKKSSS 151 57899*****************************************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 324 aa Download sequence
MMAINRRVTS YVGPSCRPGP PLRGAVSLHA KANFFIFISF FLEFQVPTME ISSSDYHHQI 60 MNTHTLEDVL VQQDQQQQQQ QQEKKPRPSP ETALKCPRCE STNTKFCYYN NYSLSQPRYF 120 CKGCRRYWTK GGSLRNVPVG GGCRKNKKSS SNSSSSSSSS SSSKRSHDHY PLNTLPTPPP 180 PFSPFDPNDL TLAFARLHNP NPNPNTSPSF ITTTPYSNTA LLDALRTGNT STNPSGFQSL 240 YYDNCLGLDG GNLFGSSVTT TTATITTTTT TSSSHEAMDH HGEENKAYLG LQWQLGNLDA 300 GRDYWNGVNS SSWHDAGLIN SSLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	1e-32	Dof family protein

Link Out ? help Back to Top
Ensembl	Dr15998.1