PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr16065.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

WOX

Protein Properties

Length: 202aa MW: 22790.5 Da PI: 8.725

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr16065.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.6	8.8e-18	6	64	2	55
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRake 55 ++R+++t+eq eLe+++++ + p+ ++++ +++ l +++ ++V++WFqN+Ra+e Dr16065.1 6 STRWCPTSEQRMELENMYRSgLHSPDVSQIQLITTYLscygKIEGKNVFYWFQNHRARE 64 58***************99**********************************97 PP
2	Wus_type_Homeobox	95.4	4.7e-31	5	67	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 ++tRW+Pt+eQ + Le++y+sGl +P ++iq it+ L+ yGkie+kNVfyWFQN++aRe qk Dr16065.1 5 PSTRWCPTSEQRMELENMYRSGLHSPDVSQIQLITTYLSCYGKIEGKNVFYWFQNHRAREGQK 67 689*********************************************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence
MPQTPSTRWC PTSEQRMELE NMYRSGLHSP DVSQIQLITT YLSCYGKIEG KNVFYWFQNH 60 RAREGQKLRK RXARQLVLHN PNLNNQLIHT FEEPRLHPQQ LGGAQDADQA MNLLSKLEAE 120 EGQDGIIGTA NGIGISYGYX VHPSCRPLIA LELFPCKSSV SNSKKAKLVE PMKKIRRSLE 180 FLTSRDAELG VPPEHVPSPG CS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28610.1	6e-30	WOX family protein

Link Out ? help Back to Top
Ensembl	Dr16065.1