PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr16066.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

WOX

Protein Properties

Length: 177aa MW: 20107.6 Da PI: 5.7817

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr16066.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.7	4.6e-19	6	66	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++t+eq eLe++F + + p+a++++ +++ l +++ ++V++WFqN+Ra+e++ Dr16066.1 6 STRWCPTPEQKMELENMFISgLQRPDASQIQMITAYLscygKIEGKNVFYWFQNQRARERQ 66 58***************99************************************97 PP
2	Wus_type_Homeobox	97.4	1.1e-31	5	67	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 ++tRW+PtpeQ + Le+++ sGl+ P +++iq ita L+ yGkie+kNVfyWFQN++aRerqk Dr16066.1 5 PSTRWCPTPEQKMELENMFISGLQRPDASQIQMITAYLSCYGKIEGKNVFYWFQNQRARERQK 67 689***********************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 177 aa Download sequence
MPQTPSTRWC PTPEQKMELE NMFISGLQRP DASQIQMITA YLSCYGKIEG KNVFYWFQNQ 60 RARERQKLRQ RLAMQLVLPN LNFNNQLIHT FEEPPLHLQE GTQDADQAMN LLSKLDANGK 120 NEVIGMESGI GTSYGYDVXP CSRPLITLDL FPCKSTGLRD ECSPSSKNSS CSTYTDL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28610.1	6e-31	WOX family protein

Link Out ? help Back to Top
Ensembl	Dr16066.1