PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr16106.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family bHLH
Protein Properties Length: 290aa    MW: 32226.8 Da    PI: 4.6799
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr16106.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.41.7e-102152551055
                HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                r+RR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  Dr16106.1 215 RKRRERINERLRILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 255
                9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MEPMTMSFEE SDIMAQLLGN THDFNLAMPS MFWSNEFSDN FWPQTSNGVF DVAYSVPDCA  60
FDGLSVPVNS VDTTMECFFV EDEQTMMATA PPVHVVPSQX LLGDDLRDSG LKRKFDAAVT  120
EKDDDVSNAS SKKKPRVTTV KRSTKKARKN SQTKDEDDNN ASPNGHSSSC SSSDDELNGR  180
GGMSSSTKDS EALNLSGKTR ASRGSATDPQ SLYARKRRER INERLRILQN LVPNGTKVDI  240
STMLEEAVQY VKFLQLQIKL LSSDDMWMYA PIAYNGMDIG LDLNLLPQKQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1133149KKPRVTTVKRSTKKARK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.14e-49bHLH family protein