PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr16339.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 268aa    MW: 29035.6 Da    PI: 5.533
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr16339.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.18.2e-173988255
        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                y+GVr++  +g+WvAeIr+p   + r +r +lg+f t +eAa a++ a+++l+g
  Dr16339.1 39 TYRGVRQRT-WGKWVAEIREP---N-RgARLWLGTFNTSFEAAVAYDGAARALYG 88
               69****999.**********8...3.35***********************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MAGEEEEGQK SKQRKCCPLR RSRKGCMKGK GGPENQRCTY RGVRQRTWGK WVAEIREPNR  60
GARLWLGTFN TSFEAAVAYD GAARALYGPC ARLNLPESXT QISQPQTLSF SGSCSGSVSS  120
SPVETSTANA AAVACCGGGG GGESEGMSGG GRDWEEFLMK LPKAEDMGLG GFREVAPLLE  180
GVCSYGCGFV YVSLAKFWDA DKLEQPPSAA PSEVFLAKFW NADELEQPPS AAPSEVFLAK  240
FWDADESWSS LFLLLLQKSS WLILRVVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.11e-42ERF family protein