PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr16463.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family MYB_related
Protein Properties Length: 73aa    MW: 8527.26 Da    PI: 4.639
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr16463.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.11.8e-122767345
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                      +++eE+ l+++  ++lG + W++Ia +++ gRt++++  +w 
        Dr16463.1 27 EFSEEEESLIIRMYNLLGDR-WSLIAGRIP-GRTAEEIERYWK 67
                     79****************99.*********.***********7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 73 aa     Download sequence    
MSDSHHSSDN TSEDTSKKQS PKFQDDEFSE EEESLIIRMY NLLGDRWSLI AGRIPGRTAE  60
EIERYWKSRC STN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46410.14e-16MYB_related family protein