PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr16568.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family NAC
Protein Properties Length: 309aa    MW: 36346 Da    PI: 7.4338
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr16568.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM175.31.7e-5471321125
        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 
                +ppGfrFhPtdeelv++yL+kkv++++++l +vikevd+yk+ePwdL++  k+ a +++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk+++s ++
  Dr16568.1   7 VPPGFRFHPTDEELVDYYLRKKVASRRIDL-DVIKEVDLYKIEPWDLQEkcKIGAdDQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKPIYS-RN 104
                69****************************.9***************952444443555**************************************.99 PP

        NAM  98 elvglkktLvfykgrapkgektdWvmhe 125
                +l+g++ktLvfykgrap+g+k+dW+mhe
  Dr16568.1 105 NLIGMRKTLVFYKGRAPNGQKSDWIMHE 132
                9**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MNTFSHVPPG FRFHPTDEEL VDYYLRKKVA SRRIDLDVIK EVDLYKIEPW DLQEKCKIGA  60
DDQNEWYFFS HKDKKYPTGT RTNRATTAGF WKATGRDKPI YSRNNLIGMR KTLVFYKGRA  120
PNGQKSDWIM HEVFKKRVAA IRKVNEHESP SWYDEHVSFM PELESPKRLL GTHHQPDMQQ  180
LHHNLYTCKQ ELEMHYHLHA HHDPFLQLPQ LESPKLPNNF INNGPCTLLQ QPSSTIPVTH  240
HDQIISLFSN NTNIEHHHHQ DVDQVTTDWR VFDKFVASQL SQEDDHHGSK GSTEMPMCFG  300
INILNLIRY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12260.11e-102NAC family protein