PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr16754.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

C2H2

Protein Properties

Length: 227aa MW: 26236.9 Da PI: 8.3638

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr16754.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	20.1	1.7e-06	88	107	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C+ C+k+F+r nL+ H+ Dr16754.1 88 FSCHVCKKTFNRYNNLQMHM 107 89*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 227 aa Download sequence
MESHNTDPGP LEPLPLINYF LHSSTVHEHL DVNEEEEGDN GVELELGLPI LSSFGNSEKP 60 ETGKQKEEET RWYWIPTPEQ ILTEFTTFSC HVCKKTFNRY NNLQMHMWGH GSEYRQESKL 120 VRGVQPRVVV GLACYCCEEG CKNNIRHPKA KPLKDMRTLR THYKRKHGAK SFGCRRCGRL 180 WAVKGDWRTH EKNCGKVWLC QCGADFKHKR SLTDHIKAFG FGHVSIV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34790.1	4e-86	C2H2 family protein

Link Out ? help Back to Top
Ensembl	Dr16754.1