PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr16759.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family bHLH
Protein Properties Length: 355aa    MW: 39440.7 Da    PI: 5.1086
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr16759.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH49.76.4e-1661107455
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 hn  E+rRR+riN+++  L+ l+P++      K +Ka++L +A+eY+k+Lq
  Dr16759.1  61 VHNLSEKRRRSRINEKMKALQNLIPNS-----NKTDKASMLDEAIEYLKQLQ 107
                6*************************7.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MMMPFSSYGE DSSGSGRRKT PELDLDGYDC ESEEGAEASE VAGKHVASRP SGSKRSRAAE  60
VHNLSEKRRR SRINEKMKAL QNLIPNSNKT DKASMLDEAI EYLKQLQLQV QMLSMRNGLS  120
LHPMYLPNNL SPMQGSQMNL GFAVDGDSVM NMGLGGMLPL NQDSSQGNSF DMLSRSTPSN  180
QSIVIPSESI VIPNAANVSD LECSFHMESS QAHNRSFHMP VATEFKEMLT EEMVTQHQLN  240
SAQSMQNLPE NNIKSVAAST SLPFGRQASF VEGAZSLETN MLVSERSQDV LSKNSDHQIF  300
NQQFNRTFSL DLGCSTNDEV YLFLILSESP MQITIRFRFK TAIFGFINYR TGTES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.14e-40bHLH family protein