PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr17114.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 208aa    MW: 23172.1 Da    PI: 7.934
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr17114.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.84e-164091255
        AP2  2 gykGVrwdkkrgr..WvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ykGVr++ + g   Wv+e+r+p++   + r++lg++ tae+Aa+a++ a+ +l+g
  Dr17114.1 40 IYKGVRRRGR-GEgrWVCEVREPKK---KSRIWLGTYATAEMAARAHDVAAIALRG 91
               69***87764.4445*******854...6*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MESHTSIDSS DSDCNYATIF STPPKRRAGR TKFRETRHPI YKGVRRRGRG EGRWVCEVRE  60
PKKKSRIWLG TYATAEMAAR AHDVAAIALR GRSACLNFAD SAWRLPVPES ASPRAIRAAA  120
AMAAERFGSG EGTGYRRGVG GETGVAAMME VREKGVLDLE WLDCEGIFGE DYYYYENLAQ  180
GLLLDPPLLT GLDDVDFSAY VSLWNYNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.12e-33ERF family protein