PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr17115.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 212aa    MW: 23547 Da    PI: 5.4321
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr17115.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.72.1e-164394255
        AP2  2 gykGVrwdkkrgr..WvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                y+GVr+++ rg   Wv+eIr+p++   + r++lg++ tae+ a+a++ a+ +l+g
  Dr17115.1 43 IYRGVRRRS-RGEgrWVCEIREPNK---NSRIWLGTYATAEMXARAHDVAAIALRG 94
               69***8877.45556*******944...6*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MESKKHTSFS NSDDTDGGYA TISTAPPKRR AGRTKFRETR HPIYRGVRRR SRGEGRWVCE  60
IREPNKNSRI WLGTYATAEM XARAHDVAAI ALRGRSACLN FADSAWLLPV PVSHSPRSIR  120
AAAAVAAERF GRGEEEKVRT VVEGVANAGE GPRDTGDEAM GRSEWFDCAE MEMAEGYYYA  180
SMAEGLLLDP PPMGECDDVE YDADVELWSY SI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.18e-46ERF family protein