PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr17117.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 214aa    MW: 23217 Da    PI: 4.9924
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr17117.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.84.2e-164192255
        AP2  2 gykGVrwdkkrgr..WvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ykGVr++ + g   Wv+e+r+p++   + r++lg++ tae+Aa+a++ a+ +l+g
  Dr17117.1 41 IYKGVRRRGR-GEgrWVCEVREPKK---KSRIWLGTYATAEMAARAHDVAAIALRG 92
               69***87764.4445*******854...6*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MESSHTLVSN SDSDSNYATI LSAPPKRRAG RTKFRETRHP IYKGVRRRGR GEGRWVCEVR  60
EPKKKSRIWL GTYATAEMAA RAHDVAAIAL RGRSACLNFA DSAWRLPVPD SASPKAIRAA  120
AAMAAEAFGP GKGLGLKEVA VASSPSDEGE GVVEAVAAIE EGFDFEWLDY LGMGLQEGYY  180
YESLAEGLLV DPPVLTGLDD VDFSADVDLW SYSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.18e-39ERF family protein