PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr17167.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

NF-YB

Protein Properties

Length: 161aa MW: 18181.6 Da PI: 4.3755

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr17167.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	70.6	2.7e-22	22	106	8	92
NF-YB 8 lPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyre 92 l a + +i+k++lP + ++++da++++ ec +efi +v+se+++ c re+++ti+++ +l al lGf +y+e++ + +++r+ Dr17167.1 22 LLSATMFKIIKEMLPPDVRVARDAQDLIVECCVEFINLVSSESNEVCSREDKRTIAPEHVLKALEVLGFGEYIEEVYAAYEQHRQ 106 5568899*******************************************************************99887777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 161 aa Download sequence
MEPMDIVGKS KEDVSLPKVL FLLSATMFKI IKEMLPPDVR VARDAQDLIV ECCVEFINLV 60 SSESNEVCSR EDKRTIAPEH VLKALEVLGF GEYIEEVYAA YEQHRQETLD SPKGGKFSGN 120 EMTEEEALAE QQRMFAEARA RMNNGLNLQQ KQLDSEHASD S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23090.4	1e-83	NF-YB family protein

Link Out ? help Back to Top
Ensembl	Dr17167.1