PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr17283.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family GATA
Protein Properties Length: 254aa    MW: 27489.8 Da    PI: 8.9648
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr17283.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA51.71.2e-16175212136
       GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkglk 36 
                C++Cg ++  Tp++Rrgpdg++tLCnaCGl ++ kg++
  Dr17283.1 175 CHHCGISSksTPMMRRGPDGPRTLCNACGLIWANKGTM 212
                *****99999*************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MSENPGEAGE LRPGSFDGGG GGGGGSAEEG EGMEGVMLPQ VGSNQLTLSF QGEVYVFDSV  60
SPDKVQAVLL LLGGKEITGG LSPPGSSSHQ NNKRSNFPHR VASLMRFREK RKERNFDKKI  120
RYTVRKEVAL RMHRNKGQFT SSKTKHEDAA VSITNMDTPQ HWADVEGRPQ SAPICHHCGI  180
SSKSTPMMRR GPDGPRTLCN ACGLIWANKG TMRDLSKNPM TPIHNAPSEQ KELNNTTIES  240
GTEHATNGHV SIIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.22e-80GATA family protein