PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr17453.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

NF-YB

Protein Properties

Length: 226aa MW: 23149.4 Da PI: 6.7893

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr17453.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	184.8	6.8e-58	23	118	2	97
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 reqdrflPianvsrimkk+lPanakiskdaketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfe+yveplkvyl+k+re+egek Dr17453.1 23 REQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQKFREMEGEK 118 89********************************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 226 aa Download sequence
MADSDNESGG TNAVGNSEFS SPREQDRFLP IANVSRIMKK ALPANAKISK DAKETVQECV 60 SEFISFITGE ASDKCQREKR KTINGDDLLW AMTTLGFEEY VEPLKVYLQK FREMEGEKGT 120 PSSQSQQKDG SSTTSGGGGG NGSGSVTVSM GNNVASYGGA GGMYGGAGGG MMMMGHQMYG 180 SSPSSSSSYQ HHQLGLGGKN SIAGGGGGGG AGNSGSSGGI GRQGRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14540.1	6e-73	NF-YB family protein

Link Out ? help Back to Top
Ensembl	Dr17453.1