PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr18205.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family E2F/DP
Protein Properties Length: 331aa    MW: 37386.2 Da    PI: 8.8893
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr18205.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP82.14.7e-2695175171
    E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 
                rkeksL++ltq+f+kl+ +s++++v+l+e+a+ L+ +     ++k+k+RR+YDi+NVL+++nliek     ++k+++rw g
  Dr18205.1  95 RKEKSLGQLTQNFVKLFLTSNADTVSLDEAARLLLGDcndatQMKTKVRRLYDIANVLSSMNLIEKtqqvvTKKPAFRWLG 175
                79********************************************************************99*******87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MAIASPCFLE SEDRHQVLTR KAKNRYSWIG FSGIPKALED LKKEALRDLS RYPGDDQCSQ  60
VSEEEENDRS MDHEEGIRED KSSSGSHKNV RSDNRKEKSL GQLTQNFVKL FLTSNADTVS  120
LDEAARLLLG DCNDATQMKT KVRRLYDIAN VLSSMNLIEK TQQVVTKKPA FRWLGNQGKP  180
DMGVTVAIPP CTSQIKKRTF GSEITNLDFK RSRSVSYVDK KPDXLQXRKE DLKACNLAAQ  240
KQLQTSKGYV FGPFQPGGVT REGGNESDMG RSKVQDWESL ASSFRPQYHN QALSDLFAHY  300
LEAWKSWFAE VTQGSSSXLQ QPYKSIINQL S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48160.21e-74E2F/DP family protein