PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr18286.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 183aa    MW: 20365.5 Da    PI: 5.5059
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr18286.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.64.1e-2058106355
        AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                y+G+r+++ +g+W+AeIrdp++     r++lg++ tae+Aa+a++aa+++++g
  Dr18286.1  58 YRGIRRRP-WGKWAAEIRDPRK---GSRVWLGTYATAEDAARAYDAAAREIRG 106
                9*******.**********954...3*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MCGGSLITEL QDLDADRRRY VVTPEHKPQG CEGXKTEKPL EEEEEIKGNE GKRRKNAYRG  60
IRRRPWGKWA AEIRDPRKGS RVWLGTYATA EDAARAYDAA AREIRGSKAK LNFPTDEAPI  120
EKKPRAGTSS EEPAVAAPAT TSPEEALRER IAGLEELLGL EHEIPGFDLG AWNAEKGCWA  180
SFE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15364RRKNAYRGIRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.12e-21ERF family protein