PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr18287.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 209aa    MW: 24229.7 Da    PI: 8.6235
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr18287.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.61.6e-183785355
        AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               y+G+r+++ +g+W+AeIrdp +     r++lg+f t+e+Aa+a+++ +++++g
  Dr18287.1 37 YRGIRRRP-WGKWAAEIRDPXK---GVRVWLGTFSTPEDAARAYDREALRIRG 85
               9*******.**********843...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MCGGSAIAHL IPPKDRSESM SLPPKDGKRK RERKNEYRGI RRRPWGKWAA EIRDPXKGVR  60
VWLGTFSTPE DAARAYDREA LRIRGSKAKL NFPNQELPSS SRIFYNSDAS IVPERKNTKI  120
KEFBMSTSTN YYNNAIYNDI VNEDNSLXVN KPXBMEVRES SMNPNXENCQ YIFENTSTVI  180
BNVGMQMETK EFDTNAIAED MFWNFNYIF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12844KRKRERKNEYRGIRRRP
22945KRKRERKNEYRGIRRRP
33046KRKRERKNEYRGIRRRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47520.18e-38ERF family protein