PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr18338.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

TCP

Protein Properties

Length: 61aa MW: 6857.99 Da PI: 12.2367

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr18338.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	32.7	2.5e-10	26	47	7	28
TCP 7 rhskihTkvggRdRRvRlsaec 28 r++++hTkv+gR+RR+R++a + Dr18338.1 26 RTKDRHTKVEGRGRRIRMPAAT 47 9******************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 61 aa Download sequence
MLQKPSALRT KESRSCKRHL DPVWARTKDR HTKVEGRGRR IRMPAATLSQ PSSPAPVVSP 60 P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	1e-08	TCP family protein

Link Out ? help Back to Top
Ensembl	Dr18338.1