PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr18654.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

MYB_related

Protein Properties

Length: 178aa MW: 21093.4 Da PI: 9.5219

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr18654.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.7	4.8e-17	22	65	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 + ++T+eE+e+l+ + +G++ W++Iar+++ gRt++ +k+ w+ Dr18654.1 22 KSPFTEEEEERLLASHXIHGNR-WAAIARHFP-GRTDNAVKNQWHV 65 679*****************.*****.*********86 PP

Sequence ? help Back to Top
Protein Sequence Length: 178 aa Download sequence
MSTRGKSCRL RWFNQLDPRI KKSPFTEEEE ERLLASHXIH GNRWAAIARH FPGRTDNAVK 60 NQWHVIMARR YRERSRVCSR GEAQRQEIIK KRNLDAKNIA SFLDKYCRSV QNYPMINESN 120 MRQNRDSSIE FYDFLQVNND LENAKQGLER VEEQKEEVKE NESKSCVPFI DFFSVGSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17950.1	4e-42	MYB family protein

Link Out ? help Back to Top
Ensembl	Dr18654.1