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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | Dr18674.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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| Family | C2H2 | ||||||||
| Protein Properties | Length: 222aa MW: 24332.3 Da PI: 5.5088 | ||||||||
| Description | C2H2 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | zf-C2H2 | 13.1 | 0.00028 | 80 | 102 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
++C++C + F ++ L H++ H
Dr18674.1 80 FSCNYCQRKFFSSQALGGHQNAH 102
89*****************9988 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 222 aa Download sequence |
MNTSDREAIE DASEEVSSQV ASNLSIQESS PFISKDADTI SAQPVSLXLT LTINSDVSAT 60 SESSTEHHHP GDISVPARVF SCNYCQRKFF SSQALGGHQN AHKRERSLAK RALRMSXFPD 120 AYASMASLPL HGSALHALGI KAHSSMHQGM FQSQDXRGSS RSDRGLLGPM PMFMEDDELD 180 LYWPRSFRPV SASGFEIIGN SSVNYVPMDS IPQEEPDLTL KL |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT1G66140.1 | 7e-35 | C2H2 family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | Dr18674.1 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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