PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr18951.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family NF-YA
Protein Properties Length: 284aa    MW: 30983.4 Da    PI: 9.7208
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr18951.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA105.93.4e-33133189158
  CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                dep+YVNaKQy++Il+RRq Rakle+++kl  k+rkpylheSRh hAl+R+Rg+gGrF
  Dr18951.1 133 DEPIYVNAKQYHGILRRRQLRAKLEAQNKL-VKARKPYLHESRHLHALKRARGTGGRF 189
                79****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MDSMAQHCYQ IKHLGHQLVD QDSSSTQSTV QSHREVSAAR KDGLQQSVSS DSGNDNTYKQ  60
VEGSVSGLSL GNSGVLFSSP KLDYSQSIAC LPYPYADPYY GHVLASYGSH AIIHPQVAGM  120
TSRVPLPLEP AADEPIYVNA KQYHGILRRR QLRAKLEAQN KLVKARKPYL HESRHLHALK  180
RARGTGGRFL NTKKSEQTSQ PNXAADRQNI SSSVVQPAGR NTLESEILLS DMNSMNTASS  240
DITTISNGGT LPHQSHLAFS SDFMQGAAGG MIHNGTRNRV PVMR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.13e-48NF-YA family protein