PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr19003.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

NAC

Protein Properties

Length: 338aa MW: 38410.8 Da PI: 6.7507

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr19003.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	164.5	3.7e-51	11	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 +ppGfrFhPt+eel+++yL+kk++++k++l +vi+++d++k+ePwd+++k+k +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk +++ + Dr19003.1 11 VPPGFRFHPTEEELLNYYLRKKLASEKIDL-DVIHDIDLNKLEPWDIQEKCKIgstPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIYT-SF 108 69**************************.9***********964444222455**********************************.88 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 + +g++ktLvfykgrap+g k+dW+mheyrl Dr19003.1 109 KRIGMRKTLVFYKGRAPHGLKSDWIMHEYRL 139 89*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence
MSITVNGHSR VPPGFRFHPT EEELLNYYLR KKLASEKIDL DVIHDIDLNK LEPWDIQEKC 60 KIGSTPQNDW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR DKVIYTSFKR IGMRKTLVFY 120 KGRAPHGLKS DWIMHEYRLD DQPDTNSPNV SCMTGDQNIG GGGQEDGWVV CRVFKKKNHH 180 KVVENQNINE SKTTQILHSN NDGALDQILH YMGRSCKQEN NPLDNINNSN SLRYLLPLDK 240 FMKLPPLESP TSVPSSSHSD DYPPPPDGIQ AVVSMCSGYN TEPAGVDNWA TLDRLFASHL 300 SGFDDTIYHD YQSAGENDLW SFTRPESGHL GDKNNESM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	1e-101	NAC family protein

Link Out ? help Back to Top
Ensembl	Dr19003.1