PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr19216.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

WRKY

Protein Properties

Length: 198aa MW: 22986.5 Da PI: 8.4634

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr19216.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103.7	1e-32	124	182	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vk+s +prsYYrCt+++C+vkk+ver +ed ++v++tYeg+Hnh+ Dr19216.1 124 LDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNHS 182 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 198 aa Download sequence
MEGGREGAQR RYVFEVPPLA SPIEFAQQEE NFHGLSFMIP SQTSTPFNPL NAAFSFENPN 60 PVSGNEEVGT SDPKVGHDQN FSARDGVNSW WKSSSISEKG KMKVRRKMRE PRFCFQTRSD 120 VDVLDDGYKW RKYGQKVVKN SLHPRSYYRC THNNCRVKKR VERLSEDCRM VITTYEGRHN 180 HSPCDDTNSS EHEYYNSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44745.1	6e-67	WRKY family protein

Link Out ? help Back to Top
Ensembl	Dr19216.1