PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr19394.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

BES1

Protein Properties

Length: 703aa MW: 78993.9 Da PI: 5.236

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr19394.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	127.2	2.1e-39	74	148	1	75
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskp 75 +gs+r ++ +E+E++k+RER+RRai+a+i+aGLR++Gny+l++raD+neV++AL+reAGwvv +DGtt++ p Dr19394.1 74 TGSRRCRPKEEKERTKLRERHRRAITARILAGLRRHGNYNLRVRADINEVIAALAREAGWVVLPDGTTFPSRPGP 148 5899*****************************************************************954333 PP

Sequence ? help Back to Top
Protein Sequence Length: 703 aa Download sequence
MAQEMEKLGG TSEEDEDEEE LEMEVKEEED DDVPSGPEMV IGAMGDAMNA GFFDDDQQRR 60 AMXATAMHQQ QGGTGSRRCR PKEEKERTKL RERHRRAITA RILAGLRRHG NYNLRVRADI 120 NEVIAALARE AGWVVLPDGT TFPSRPGPGA TAPSPQAGKL AGVTTAAVAP APXVMAXSQA 180 MPLRGVSPTG PFXSLECRPC RLKGVYTPAS TPYESRGRMV VMVDRDRTAE NSPLVGSSMD 240 TVDDKQVVDI TGRLPERDFA GTPYVPVYVM LPLGVVNMKC ELVDPDGLLK QLRLLKSINV 300 DGVMVDCWWG IVEAHAPQEY NWSGYKRLFQ IVRELKLKLQ VVMSFHECGG NVGDDVCIPL 360 PHWVAEIGRT NPDMFFTDKE GRRNPECLTW GIDKERILRG RTAVEVYFDY MRSFRVEFDE 420 FFEDGVISEI EIGLGPCGEL RYPSYPVKHG WRYPGIGEFQ CYDQYLMKSL RRAAEARGHS 480 FWARGPDNXG NYNSQPHETG FFCDGGDYDG YYGRFFLGWY SQVLVDHADR VLSLSKLAFE 540 GTRIAAKVSG IHWWYKTASH AAELTAGFYN PCNRDGYASI AAMLKKHDAA LNFTCVELRT 600 LDQHEDFPEA LADPEGLVWQ VVLNAAWDVS IPVASENALP CHDRDGYNKI LENAKPFNDP 660 DGRHLSAFTX LRLSPVLIER RNFLEFERFV KRMHGEAVLD LQT

Sequence ? help Back to Top

Protein Sequence Length: 703 aa Download sequence

MAQEMEKLGG TSEEDEDEEE LEMEVKEEED DDVPSGPEMV IGAMGDAMNA GFFDDDQQRR  60
AMXATAMHQQ QGGTGSRRCR PKEEKERTKL RERHRRAITA RILAGLRRHG NYNLRVRADI  120
NEVIAALARE AGWVVLPDGT TFPSRPGPGA TAPSPQAGKL AGVTTAAVAP APXVMAXSQA  180
MPLRGVSPTG PFXSLECRPC RLKGVYTPAS TPYESRGRMV VMVDRDRTAE NSPLVGSSMD  240
TVDDKQVVDI TGRLPERDFA GTPYVPVYVM LPLGVVNMKC ELVDPDGLLK QLRLLKSINV  300
DGVMVDCWWG IVEAHAPQEY NWSGYKRLFQ IVRELKLKLQ VVMSFHECGG NVGDDVCIPL  360
PHWVAEIGRT NPDMFFTDKE GRRNPECLTW GIDKERILRG RTAVEVYFDY MRSFRVEFDE  420
FFEDGVISEI EIGLGPCGEL RYPSYPVKHG WRYPGIGEFQ CYDQYLMKSL RRAAEARGHS  480
FWARGPDNXG NYNSQPHETG FFCDGGDYDG YYGRFFLGWY SQVLVDHADR VLSLSKLAFE  540
GTRIAAKVSG IHWWYKTASH AAELTAGFYN PCNRDGYASI AAMLKKHDAA LNFTCVELRT  600
LDQHEDFPEA LADPEGLVWQ VVLNAAWDVS IPVASENALP CHDRDGYNKI LENAKPFNDP  660
DGRHLSAFTX LRLSPVLIER RNFLEFERFV KRMHGEAVLD LQT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45880.1	0.0	BES1 family protein

Link Out ? help Back to Top
Ensembl	Dr19394.1