PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr19625.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 218aa    MW: 23815.2 Da    PI: 10.6661
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr19625.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2643e-2091140255
        AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 y+GVr ++ +grW AeIrd +   g r r++lg+f+tae+Aaka++aa+++l+g
  Dr19625.1  91 NYRGVRKRP-WGRWSAEIRDrV---G-RCRHWLGTFDTAEDAAKAYDAAARRLRG 140
                59*******.**********55...2.59************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MNQLKPYPTS PETHHPPIPP PPLDGIGAVV GYHVLFGNKH EEKQSTMLIA NETLRIKNGN  60
NTTTSSSSNE GVLMMINNNN NNNNNDNNNK NYRGVRKRPW GRWSAEIRDR VGRCRHWLGT  120
FDTAEDAAKA YDAAARRLRG SKARTNFPSS LFIPIPIPST PNSTTSTSTP SRKKCTRVSS  180
XSQLCTSSSS SSSSSSTSTS FCVEGLKGRQ GGHLVNHA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80580.15e-19ERF family protein