PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr19864.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 227aa    MW: 26045.8 Da    PI: 9.2047
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr19864.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.51.2e-11110151351
        AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                 +GV++  k+ +W A I++      +k+++lg+ g+ eeAak++++a+ 
  Dr19864.1 110 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEEAAKLYDRAAF 151
                59**98..47*********4.....5********************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MVSLRRRKLL GLCSGKKSFP VELPKHAEIG SVTETPKQYV RSFSVHPMPL VDSFDDKQMD  60
IAQTHPGSSS VILSGSCKEE PDHCFPVEKH IKHRKRHRRK HYNDQEPCMM RGVYFKNMKW  120
QAAIKVDKKQ IHLGTVGSQE EAAKLYDRAA FMCGREPNFE LSEEDKLELS QYNWEEFLSM  180
TRNAITSKKQ QRRFCSARGR KLEAGPGALM SQSMSLSDDG DVDSYFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.11e-46ERF family protein