PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr19903.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 294aa    MW: 31810.4 Da    PI: 9.6786
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr19903.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.22e-1878127255
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                +y+GVr+++ +g+WvAeIr+p+    r +r +lg+f tae+Aa+a+++a++ l+g
  Dr19903.1  78 RYRGVRQRS-WGKWVAEIREPR----RrTRKWLGTFSTAEDAARAYDRAALVLYG 127
                59****999.**********83....35**********************98887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MTTAFPLHRV TTLIPIPSSP PSPPPSHTPR HSAPHMDNSS PLSLPIEQCS SSPTSTSTTT  60
TKKKKNKGKG GPDNNKFRYR GVRQRSWGKW VAEIREPRRR TRKWLGTFST AEDAARAYDR  120
AALVLYGPRA QLNLESSSPH PSTSSSSSSS SSSSSTTTTT TTSSTPPALR PLLPRPSGFP  180
YQPLLHPIRP DNPLLRTPTD YQRTLEIGLS SASGSGSGSK PVYPNQNIYE EINSLAGSVS  240
CGLTLASPEM SLTPPADPSP PAPPVESPPM ASTWPFDDYS SYLWDDADAF FFDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40220.12e-24ERF family protein