PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr19905.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

G2-like

Protein Properties

Length: 260aa MW: 30279 Da PI: 5.1368

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr19905.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100	1.6e-31	61	114	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH +Fv+ave LGG+e+AtPk +l+lm+v+gL+++hvkSHLQ+YR Dr19905.1 61 PRLRWTPELHLCFVRAVELLGGQERATPKLVLQLMNVQGLSISHVKSHLQMYRN 114 8****************************************************6 PP
2	Myb_DNA-binding	51.7	2e-16	62	113	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e+++ +v+av++lGg t+k++ + m+ +g++ ++ks++q+y+ Dr19905.1 62 RLRWTPELHLCFVRAVELLGGQeraTPKLVLQLMNvQGLSISHVKSHLQMYR 113 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 260 aa Download sequence
MSYFESSPYD DDCNNKDYEY EDEDEENLRC GASSSNSTIE EISEKKMSSG SVRQYIRSKA 60 PRLRWTPELH LCFVRAVELL GGQERATPKL VLQLMNVQGL SISHVKSHLQ MYRNKKIDDT 120 GQIIRKNQRS SIEGNDHHVY NLNQLPDSCI SHEFPAIDRF LREVISSNQN HYSSRELDEA 180 SKQFQMFHEQ RETSHAHEPD LSLSLSIAPR QEKRQRQWVE EEEEEEEEEE DIGLSLSLNT 240 PSKQDRHVPL YRSSSHHXPG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	5e-40	G2-like family protein

Link Out ? help Back to Top
Ensembl	Dr19905.1