PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr19952.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

NAC

Protein Properties

Length: 663aa MW: 73629.1 Da PI: 4.2711

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr19952.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	170.3	6.3e-53	17	144	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 l pGfrFhPtdeelv +yLk+kv g+++ + ++i+e+d+yk+ePwdLp+ ++++++ ewyfFs+ d+ky++ +r+nrat gyWk+tgkd++vl+ +++ Dr19952.1 17 LSPGFRFHPTDEELVGYYLKRKVLGRRIAV-DAISEIDLYKHEPWDLPAmsRIQSRDLEWYFFSSLDRKYSNRSRTNRATGGGYWKTTGKDRPVLH-GSR 114 579************************9.99***********4347778888***********************************.99 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +vg+kktLv+++grap+g++t+Wvmheyrl Dr19952.1 115 TVGMKKTLVYHTGRAPRGQRTHWVMHEYRL 144 ****************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 663 aa Download sequence
MNSSMNSNAN VTPSSRLSPG FRFHPTDEEL VGYYLKRKVL GRRIAVDAIS EIDLYKHEPW 60 DLPAMSRIQS RDLEWYFFSS LDRKYSNRSR TNRATGGGYW KTTGKDRPVL HGSRTVGMKK 120 TLVYHTGRAP RGQRTHWVMH EYRLVDEGLR DSGVSQDGYV VCRIFQKSGN GPMNGAQYGA 180 PLIEEEWEEX DDMEIKPLDG DAGGLVDVGI QMDDIVKDPE VSFPPENMHH LLVEHHEEQV 240 NGSHLEISTS LRENIVGDQF YMGGVDGCPI AAVAEDDPTL TAGVEGHHLI LDQSCILLPE 300 NDGYVELNDF MENEDQDQPK NDSLADYVLE TCDEDFLINM NGCGDLPEID VDEFFDMLSE 360 TSDIPEPSQM PPLENDVSPQ PSNINSSFSK QSDAQFSESN LVSNDALEDI PFAQDSFVPK 420 YDSGPSITDV FKFDKADEMV NYFDATDNYL DFASLGPVGE FELEDFSNFE ISDFSDEFDG 480 TIIPTQNAAQ KSSYTDAGIV ASSSXMLSAP NDMANGKKDD LTVKKDVQKN DQLDKTFTER 540 LANMLNFIPS PPALAAEHPY GAIKSIDQNS TALAASSNFT AGMIHISSFT VTSTANQCYL 600 QKGRAIGFLF SYNTLGKSAS LEPAMMMHDG FTRXVLRGGL YLFLFSTLIL AGSFKIGLHM 660 CSR

Sequence ? help Back to Top

Protein Sequence Length: 663 aa Download sequence

MNSSMNSNAN VTPSSRLSPG FRFHPTDEEL VGYYLKRKVL GRRIAVDAIS EIDLYKHEPW  60
DLPAMSRIQS RDLEWYFFSS LDRKYSNRSR TNRATGGGYW KTTGKDRPVL HGSRTVGMKK  120
TLVYHTGRAP RGQRTHWVMH EYRLVDEGLR DSGVSQDGYV VCRIFQKSGN GPMNGAQYGA  180
PLIEEEWEEX DDMEIKPLDG DAGGLVDVGI QMDDIVKDPE VSFPPENMHH LLVEHHEEQV  240
NGSHLEISTS LRENIVGDQF YMGGVDGCPI AAVAEDDPTL TAGVEGHHLI LDQSCILLPE  300
NDGYVELNDF MENEDQDQPK NDSLADYVLE TCDEDFLINM NGCGDLPEID VDEFFDMLSE  360
TSDIPEPSQM PPLENDVSPQ PSNINSSFSK QSDAQFSESN LVSNDALEDI PFAQDSFVPK  420
YDSGPSITDV FKFDKADEMV NYFDATDNYL DFASLGPVGE FELEDFSNFE ISDFSDEFDG  480
TIIPTQNAAQ KSSYTDAGIV ASSSXMLSAP NDMANGKKDD LTVKKDVQKN DQLDKTFTER  540
LANMLNFIPS PPALAAEHPY GAIKSIDQNS TALAASSNFT AGMIHISSFT VTSTANQCYL  600
QKGRAIGFLF SYNTLGKSAS LEPAMMMHDG FTRXVLRGGL YLFLFSTLIL AGSFKIGLHM  660
CSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10500.1	3e-85	NAC family protein

Link Out ? help Back to Top
Ensembl	Dr19952.1