PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr20025.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

Dof

Protein Properties

Length: 225aa MW: 23973 Da PI: 8.4822

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr20025.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	119.3	1.4e-37	34	93	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 + lkcprC s+ntkfCyynny+lsqPr+fCk+CrryWt+GG lrnvPvGgg+rk +ss Dr20025.1 34 QPPLKCPRCGSSNTKFCYYNNYNLSQPRHFCKSCRRYWTRGGVLRNVPVGGGSRKPSSSS 93 6679***************************************************98876 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MQDLQSIAGA RAGFVFGSGV HRQLRGLPPA PHQQPPLKCP RCGSSNTKFC YYNNYNLSQP 60 RHFCKSCRRY WTRGGVLRNV PVGGGSRKPS SSSSKKPSSF SKKSSPSPSP CPSPSLSPIS 120 QPNPNPIADP QASPEDVIGP GAVPSILSFP EVFDPAPIAG YEIRISGFNH DAVQEDLIPS 180 GMFTGGGDID PGLFDLTYAV DPPAFWNTLS CGNWGVASDP SLFIP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38000.1	2e-31	Dof family protein

Link Out ? help Back to Top
Ensembl	Dr20025.1