PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr20067.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family WRKY
Protein Properties Length: 251aa    MW: 28618.3 Da    PI: 4.6105
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr20067.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY43.37.4e-14771201959
                SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY  19 efprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                +  rsYYrCt++   gC ++k+v++++edp+v+ itY g H ++
  Dr20067.1  77 TKRRSYYRCTHRgssGCLATKQVQKTDEDPSVLRITYYGVHSCT 120
                4679*******99999*************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MENQRRCLLD ELNRAQGLAR QLQASLGXPS TIPVCKNLAQ EILSCIEKAV CLAKPSPLED  60
YEISEQGTKE QKRRDLTKRR SYYRCTHRGS SGCLATKQVQ KTDEDPSVLR ITYYGVHSCT  120
HQRPTEVQIS CMKKEEEEEE EEEEEEEQLQ HKGLKQDNHN NEQQQQIQLN IQSFLTSANK  180
PGDEASSSFS FNFDPALGSS SSTTFPQTSS LSKKPELGDY MPEMLDMDFM ADTNFSFVDT  240
SNFFSDDDKR N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.13e-13WRKY family protein