PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr20108.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

bHLH

Protein Properties

Length: 285aa MW: 31837.7 Da PI: 8.7422

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr20108.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	32.6	1.5e-10	134	181	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ rE+ RRdr+N++f+eL ++l + + +K +K++iL+ A + +k+L Dr20108.1 134 TKACREKMRRDRLNDRFAELCSILDPG---KPPKADKVAILTDANRLLKQL 181 5678********************9...99***********999999 PP

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence
MNGLCTELAG KEEDSNLRLK TNDRSPKDKE GKGMEFGLGL GLGLGLGLTL VCRKGRANGW 60 AIDRQLMESC QNLGGGWLAD YGLDDEVTSV DFIWPPSVTS AILEFDASHK VDNFSENNCT 120 KKRTRVESCA APGTKACREK MRRDRLNDRF AELCSILDPG KPPKADKVAI LTDANRLLKQ 180 LRLEAQKLKE SNEALQVSIK NLKAEKVELR DEKVRLKAEK ERMEKLLRCM NIAPPPLHSF 240 QHAVFSVPNK AIPYPTYKTP MGMWQWIPPA ALDTSQDHVL RPPVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G54680.1	1e-61	bHLH family protein

Link Out ? help Back to Top
Ensembl	Dr20108.1