PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr20180.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 190aa    MW: 20887.6 Da    PI: 4.9001
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr20180.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.62.7e-171261255
        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               ++kGVr+++ +g+Wv+eIr p++   r r++lg+++ +e+Aa+a +aa+ +l+g
  Dr20180.1 12 RFKGVRRRR-WGKWVSEIRLPNS---RERIWLGSYDAPEKAARAFDAAAYCLRG 61
               69****777.**********933...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MTRLAESSED VRFKGVRRRR WGKWVSEIRL PNSRERIWLG SYDAPEKAAR AFDAAAYCLR  60
GRRAXLNFPE NPPCISSPKS LTHQQIRLAA ARHANAIPVG XAAAGTSAAE SSSANSLTPL  120
PEQPLPHSES DASDGLTPES EQGGLEPEPV DWSAVGFPDI DDLNYYHPIV QEPPPPDSDE  180
NGLSYNLWSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.12e-43ERF family protein