PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr20322.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family WRKY
Protein Properties Length: 306aa    MW: 34061.3 Da    PI: 7.9083
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr20322.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.67.2e-30159218159
                ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                ++Dgy+WrKYGqK+ +++++pr+Y+rC++a +C+vkkkv+rsae++++ve+tYegeH+h+
  Dr20322.1 159 VKDGYQWRKYGQKVTRDNPCPRAYFRCSFApTCQVKKKVQRSAENQSIVEVTYEGEHTHN 218
                58***************************99****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MESITMEQSS LSLDLSVGSH WLSHQPMKAT RNSNAITSGE SKSKEVVNLR AELNRMNEEN  60
ERLSEMLQNM CEKYSALQSQ MMDIMSESGS EGGSAAPETS PEKKRKRHNS KTQNEIVSNA  120
MDQSISSDEC LKPIKDDQIK SKITKVYVQT NPSDTSLIVK DGYQWRKYGQ KVTRDNPCPR  180
AYFRCSFAPT CQVKKKVQRS AENQSIVEVT YEGEHTHNAP TSQSDTPKVK NNVVANFVPV  240
SKPVTDEHII NIKKKPHLDF DLSATPPAEL QYQLVEQMAS SLTKDPGFTA ALASAISGKI  300
LSFSPN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.15e-58WRKY family protein