PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr20569.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 244aa    MW: 27189.4 Da    PI: 6.8044
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr20569.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.82.8e-1885134255
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 y+GVr +  +g+Wv+eIr+p++   + r++lg+f tae+Aa+a++ a++ ++g
  Dr20569.1  85 LYRGVRMRN-WGKWVSEIREPRK---KSRIWLGTFPTAEMAARAHDVAALTIKG 134
                69****998.**********843...6**********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MELHHHHHHQ QQHQQQSSSS SSSSSSSSSS SSSSSSSKHS NKRSRNTTTT TNNINLNMTN  60
NNNNNNNNNN NNNNMNKSKN NPPPLYRGVR MRNWGKWVSE IREPRKKSRI WLGTFPTAEM  120
AARAHDVAAL TIKGQAAFLN FPELASALPR PATSSPKDIQ AAAAKAAQTT FSINVEKTNL  180
PEVEADTDID HYDYDDDALF DLPDLLIYSS PASSSSWFSN SSLDDDDIGF RLEDHQPLLW  240
EHSV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.11e-42ERF family protein