PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr20602.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 248aa    MW: 27399.9 Da    PI: 5.0605
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr20602.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.87.2e-2092142255
        AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                +y+GVr+++ +g+++AeIrdp   + +  r++lg+++ta eAa+a+++a+ +++g
  Dr20602.1  92 RYRGVRQRP-WGKYAAEIRDP---NrRGSRVWLGTYDTAVEAARAYDRAAFQMRG 142
                7********.**********9...4334*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MTSSADSSAL DLIREHLLGD IAVSDDYGCS SYRIHDPLSS MIHFGSEPEP EPEPERRPFV  60
LSIPHHEPPA VEWVTATATA TATAPTAAAE RRYRGVRQRP WGKYAAEIRD PNRRGSRVWL  120
GTYDTAVEAA RAYDRAAFQM RGCKAILNFP NEIASSGQPA IVGGGKRRRE EEEDEEVVEV  180
KVVKKERLLE YDEMVPVPVP IPAMAPLTPS IWSSVWEGGE EAKGIFSLPP LSPLSPHPQM  240
GFAQLMVQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.16e-27ERF family protein