PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr20981.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family bHLH
Protein Properties Length: 307aa    MW: 34160.8 Da    PI: 6.427
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr20981.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.20.00033185230454
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
        HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 +  r++ RR++i +a+      +P +     +K    ++L  +++YIk L
  Dr20981.1 185 RAALRDKLRRAKISEAIKAFENSMPFS-----EKRCQESVLDDVIDYIKFL 230
                567899********************8.....788889***********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MYRASLTHKA MRRTRIGAGD GVVDGEDDDS LIHCSHXSLP TLQSVHSTMR VDSKRRMLNA  60
FGDAGGARSE SPRKRFISER VHCYEISSGQ INPRPLRSIP PEVNPVDMSA DRNIEAXSYF  120
SKESKVPMGW HSFSSIDGKS SSISNNNENG ILALVPIEHN SGGQRFDSDE SPSEVNTPAK  180
DTKTRAALRD KLRRAKISEA IKAFENSMPF SEKRCQESVL DDVIDYIKFL KLQLKVLSQS  240
RLGGEAETFP FVQLEGYGHY LLHPQMSSEP LEEVMGQMLX TDMQAANELL ESKGLTILPC  300
DLAYALL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24260.16e-16bHLH family protein