PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr21036.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family FAR1
Protein Properties Length: 214aa    MW: 24699 Da    PI: 9.7739
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr21036.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1751.5e-2342130289
       FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                +Y +YAk+ GF vrk + ++s+ ++ it+r+fvC keg ++ ++k+   k+ ++r  trt+ +a++ v+k+k+g+w +++++  HnH l
  Dr21036.1  42 YYLDYAKSKGFGVRKGHVYRSSSSQVITCRHFVCDKEGAKSMSDKRqLGKTVQRRRDTRTNYQARMIVSKMKSGRWTIKTFDDVHNHVL 130
                8**************************************999888756788999*********************************88 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MHELTTQDDQ EMAMSPQSQD ERDVRIPFVG MEFEDEDAAF RYYLDYAKSK GFGVRKGHVY  60
RSSSSQVITC RHFVCDKEGA KSMSDKRQLG KTVQRRRDTR TNYQARMIVS KMKSGRWTIK  120
TFDDVHNHVL LITPSKIFFS FSFSPEVVIT SGVSTLLQIK AIKIMNWSWS VRSDPVVTSM  180
PVAAAARERE SKIFSGVGSG MEEERGREQR WDRY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.17e-17FAR1 family protein