PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr21245.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

WOX

Protein Properties

Length: 187aa MW: 21081.2 Da PI: 8.7085

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr21245.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	62.3	7.2e-20	6	66	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++t+eql +Le+++++ ++p+a++++++++ l +++ ++V++WFqN++a++++ Dr21245.1 6 STRWCPTPEQLMVLEDMYRSgLKTPNASQIQQITAYLsyygKIEGKNVFYWFQNHKARDRQ 66 58***************99***********************************996 PP
2	Wus_type_Homeobox	117.9	4.5e-38	5	67	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 ++tRW+PtpeQ+++Le++y+sGl+tPn+++iq+ita L+ yGkie+kNVfyWFQN+kaR+rqk Dr21245.1 5 PSTRWCPTPEQLMVLEDMYRSGLKTPNASQIQQITAYLSYYGKIEGKNVFYWFQNHKARDRQK 67 589***********************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 187 aa Download sequence
MPQAPSTRWC PTPEQLMVLE DMYRSGLKTP NASQIQQITA YLSYYGKIEG KNVFYWFQNH 60 KARDRQKXRR RLSRHHQLVL NHNSNPNPNP NPNQQLFHTF EEPPLYLQQG GAQDADQAMN 120 LLSKLEAQGK DGVIGPASGF GISYGYDVHP CCRPLITLDL FPSKSXGLRD ECSSSSKNSS 180 CSTSTNL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28610.1	7e-33	WOX family protein

Link Out ? help Back to Top
Ensembl	Dr21245.1