PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr21275.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family MYB_related
Protein Properties Length: 83aa    MW: 9883.51 Da    PI: 10.7091
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr21275.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.31.7e-18653148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+ Ed++lv++v ++G ++W+ Ia+  g++Rt+k+c++rw +yl
        Dr21275.1  6 KGPWTEKEDLQLVCYVGLFGERRWDFIAKVSGLNRTGKSCRLRWVNYL 53
                     79********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 83 aa     Download sequence    
MELVRKGPWT EKEDLQLVCY VGLFGERRWD FIAKVSGLNR TGKSCRLRWV NYLHPGLKRG  60
RMSPQEERLV LELHSRWGNR PVF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59780.31e-45MYB family protein