PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr21277.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

C2H2

Protein Properties

Length: 164aa MW: 17880.8 Da PI: 8.6397

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr21277.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11	0.0013	30	52	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ F++ L H +H Dr21277.1 30 FECKTCNRQFPSFQALGGHRASH 52 89**********99999998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 164 aa Download sequence
MMESINMANV LMLLSQGGEA RAPASLGRVF ECKTCNRQFP SFQALGGHRA SHKKPKTNGD 60 SRNQVTVSKP RTHECAICGL EFXIGQALGG HMRRHRALGQ GFVHVGHGAV MEKRSTSDHX 120 KVLCLDLDLN LPPSPSGVVD GENRTVLFGI DLVEKTXMVV DCFQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59820.1	3e-30	C2H2 family protein

Link Out ? help Back to Top
Ensembl	Dr21277.1