PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr21331.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

ERF

Protein Properties

Length: 162aa MW: 18490.8 Da PI: 5.6055

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr21331.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	43.1	1.1e-13	23	67	1	49
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaa 49 +gy GVr+++ + r++AeI p + +kr++lg+f+t eeAa a++ a Dr21331.1 23 TGYFGVRRRP-SRRYAAEIINPHT---NKRHWLGTFDTTEEAALAYDMA 67 5888****.7**999744...3*****************88 PP

Sequence ? help Back to Top
Protein Sequence Length: 162 aa Download sequence
MDLPDLQCIN LPRHQRRQPR GPTGYFGVRR RPSRRYAAEI INPHTNKRHW LGTFDTTEEA 60 ALAYDMASIT FSGIDRAQTI FSYEFPTMPS PPPPLPPPPP PPLSSRPPPP LPPPVPPPSE 120 EENEYYSKYD FEINNHDDDW INITTILQSF CQSNAFSSSF IL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12890.1	4e-19	ERF family protein

Link Out ? help Back to Top
Ensembl	Dr21331.1